Author Archive
LaTeX Shell Escape
by Mostafa on Mar.13, 2011, under How To ..., LaTeX
One of the lesser known features of LaTeX is its “shell-escape” mode. This is achieved using the LaTeX command \write18{cmdlist} in the document. This facility can be used to incorporate dynamic content or simply run additional processes during the compilation phase. An example document may look something like:
\documentclass{article}
\begin{document}
\immediate\write18{date > tmpdate.tex}
\input{tmpdate}
\immediate\write18{rm tmpdate.tex}
\end{document}
As \write18 is usually disabled on most systems for obvious security reasons, it must be enabled explicitly:
$ latex -shell-escape input_file
More details are available in the MiKTeX documentation under the heading “Running Programs From Within TeX“.
Create links with absolute paths in Linux
by Mostafa on Jan.16, 2010, under How To ..., Linux, Software
The default behaviour of the linking command (ln) is a little strange under certain circumstances. Since it creates the links using the literal value of the target, symbolic links created using relative path structures can often fail. Consider the following:
$ ln -s targetfile ../src/targetfile_link
Without a doubt, ‘targetfile_link’ will be a broken symlink since it links to a target that it assumes is in the same directory:
$ cd ../src && ls -l targetfile_link lrwxrwxrwx 1 mafgani mafgani 5 2010-01-16 18:19 targetfile_link -> targetfile
This is quite unfortunate since it clearly clashes with the way that the linking mechanism should work intuitively.
The solution is to force ln into automatically appending the absolute path to the target files. This can be achieved by using a simple shell script that acts as a wrapper for the real linking command:
#!/bin/sh
# Step through the supplied arguments and append the absolute
# path to targets that exist
for ARG in $@
do
if [ -e $ARG ]; then
LNARGS="${LNARGS} ${PWD}/${ARG}";
else
LNARGS="${LNARGS} ${ARG}";
fi
done
# Execute the actual link command with the modified args
exec /bin/ln ${LNARGS};
There are two known caveats:
- The link is ‘sub-optimal’ if created from within the destination directory (the absolute path contains ‘../’s). It will still work however.
- The links will always be absolute. If that is undesirable, save the script as ‘absln’ or something other than ‘ln’.
Using ‘absln’ instead of ‘ln’ in the previously described scenario now produces a working symlink:
$ absln -s targetfile ../src/targetfile_link $ cd ../src/ && ls -l targetfile_link lrwxrwxrwx 1 mafgani mafgani 16 2010-01-16 19:13 targetfile_link -> /tmp/files/targetfile
Graphics format conversion
by Mostafa on Dec.09, 2009, under LaTeX, Linux, Software
Up until now I have been using the ‘convert‘ tool that comes with ImageMagick to switch between image formats — mainly for creating EPS files from JPG/PNG (raster format) files for use with LaTeX. Then I came across sam2p.
It is a light-weight utility that does one thing only and it does it well: convert between image formats. I’ve been using it for a while now and find that it can greatly reduce files sizes with minimal drop in quality. I’ve even used it to process existing EPS files just to get the reduction in file size. Best of all, it is multi-platform — executables are available for both Windows and Linux on the project homepage.
Goodbye convert and hello sam2p!
Squeezing space in LaTeX
by Mostafa on Oct.29, 2009, under How To ..., LaTeX
Academic papers and articled often come with a predefined maximum page count and it is common to find that it’s a limit that is easily exceeded. Under such circumstances, it becomes necessary to pull a few “dirty tricks” that squeeze out every last bit of available space.
The most common approach is to simply redefine the ‘\baselinestretch’ variable in the preamble of the document. The parameter controls the scaling of the space between the bottom of two successive lines of text. Therefore, the definition used to squeeze that space by 2% is:
\renewcommand{\baselinestretch}{0.98}
While that trick alone is sufficient in most cases, it is useful to be aware of other spacing parameters that can be adjusted. The Cambridge University Engineering Department has a nice page with lots of details. I personally find ‘\textfloatsep’ to be one of the more useful ones:
\addtolength{\textfloatsep}{-5mm}
It is used to reduce the amount of space that is usually left between a float and the adjacent text block (e.g. end of caption of a top-figure and the text below).
Just Host cPanel cleanup script for Greasemonkey
by Mostafa on Oct.23, 2009, under How To ..., Software
I finally decided to get my own domain and signed up with Just Host for the registration and hosting. For now I’m only using it to host this blog that originally started its life on Blogger. The transition was fairly smooth, save for a few minor issues. I’ll talk more about the steps involved a future post (a draft is already in the queue) …
Just Host offers cPanel as a web frontend for managing and running site related tasks. It’s quite a nice tool but there is one big problem. The interface is literally littered with a bunch of annoying ads and affiliate links. Even more annoying is the fact that there doesn’t seem to be any way of permanently moving these offending boxes to the bottom of the screen. This is where Greasemonkey comes in.
Greasemonkey is a nice little extension for Firefox that allows the execution user scripts to change the way a website looks. userscripts.org is a great place for finding scripts that work on major/popular sites on the internet. A search there didn’t turn up anything useful so I decided to write my own. Install Greasemonkey if you don’t have it already and then click on this link to get the script installed. I’ve also put up a copy on userscripts.org.
The script works by setting the ‘display’ style of the offending div boxes to ‘none’. Firebug is another great tool that makes it a breeze to find out the IDs of the divs that need to be blacklisted.
[Update 10-Nov-2009]: Looks like some sneaky new ads injected using Javascript have shown up on the cPanel sidebar. Unlike the old ad boxes however, these lack div IDs. As a result, it is not possible to simply blacklist them. Fortunately, it also means that it is possible to turn the table around by simply blocking the sidebar divs that have a null ID. The script has been updated.
Before:

Before applying greasemonkey script
After:

After applying greasemonkey script
Status report
by Mostafa on Oct.23, 2009, under Life
Looks like it’s been more than a year since the last time I’ve published something here. I’ve just been really busy, now more than ever. I have been periodically saving some blurbs as drafts but I never quite seem to have the time to polish them into real posts.
I really should be working on my thesis and a number of other papers but it does get a bit tiresome. Whenever that happens, I’ll work a bit on the drafts as a distraction and hopefully manage to push a few of them out over the coming weeks…
Moving from Blogger to WordPress
by Mostafa on Oct.18, 2009, under How To ...
The initial move is easy enough using the Blogger importer plugin of WordPress. Setting up redirects from the old blog to the new one however takes a bit more work. I followed the instructions at:
http://underscorebleach.net/jotsheet/2006/05/move-blogger-to-wordpress
Printing multi-page duplex documents
by Mostafa on Oct.18, 2009, under How To ..., Linux, Software
The psnup tool can be used to place multiple pages on each sheet of a document. E.g., the following command places two pages from the input file into each sheet of the output:
$ psnup -l -2 input.ps output.ps
While psnup is excellent for quick “N-up” conversion jobs, it doesn’t provide much control over the layout. The pstops utility on the other hand allows for fine grained scale, rotation and placement settings for each page that goes into a sheet of the output. The command syntax is a bit more complicated on account of the page specification strings that must now be provided. The following example shows a typical command needed to prepare a document for duplex printing with two pages on each side of a sheet:
$ pstops -pa4 \ '4:0L@0.8(21cm,-1cm)+1L@0.8(21cm,12.55cm),2R@0.8(0,29.85cm)+3R@0.8(0,16.25cm)' \ input.ps output.ps
The command is best understood by referring to the relevant section from the manpage:
Pstops rearranges pages from a PostScript document, creating a new
PostScript file. The input PostScript file should follow the Adobe
Document Structuring Conventions. Pstops can be used to perform a
large number of arbitrary re-arrangements of Documents, including
arranging for printing 2-up, 4-up, booklets, reversing, selecting front
or back sides of documents, scaling, etc.
pagespecs follow the syntax:
pagespecs = [modulo:]specs
specs = spec[+specs][,specs]
spec = [-]pageno[L][R][U][@scale][(xoff,yoff)]
modulo is the number of pages in each block. The value of modulo should
be greater than 0; the default value is 1. specs are the page specifi-
cations for the pages in each block. The value of the pageno in each
spec should be between 0 (for the first page in the block) and modulo-1
(for the last page in each block) inclusive. The optional dimensions
xoff and yoff shift the page by the specified amount. xoff and yoff
are in PostScript’s points, but may be followed by the units cm or in
to convert to centimetres or inches, or the flag w or h to specify as a
multiple of the width or height. The optional parameters L, R, and U
rotate the page left, right, or upside-down. The optional scale param-
eter scales the page by the fraction specified. If the optional minus
sign is specified, the page is relative to the end of the document,
instead of the start.
If page specs are separated by + the pages will be merged into one
page; if they are separated by they will be on separate pages. If
there is only one page specification, with pageno zero, the pageno may
be omitted.
The shift, rotation, and scaling are performed in that order regardless
of which order they appear on the command line.
Restricting access to SFTP / SCP
by Mostafa on Oct.18, 2009, under How To ..., Linux, Software
rssh is a tool that allows SFTP/SCP for file transfers over SSH but denies shell access — useful for preventing users from running commands on the system. More details are available on the tool’s homepage.
I first came across it on this page.
Realtime collaborative text editing
by Mostafa on Nov.21, 2008, under Linux, Software
A while ago, I came across Etherpad. It a web based platform that allows multiple users to simultaneously edit a single text file. Since it doesn’t seem to support any kind of mark-up at the moment, it would seem that it’s not terribly useful for word processing tasks. Perhaps it’s good for real-time collaborative coding and the creation of agenda type lists …
The software equivalent of Etherpad is Gobby. It’s a multi-platform tool that claims to run on Microsoft Windows, Mac OS X, Linux and other Unix-like platforms — making it almost as flexible as a web-based service. There are a number of other advantages:
- Flexibility and security that comes from having absolute control over the sessions.
- Syntax highlighting!


